Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
CEP290O15078 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.21■□□□□ 0.35
CEP290O15078 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CEP290O15078 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.21■□□□□ 0.34
CEP290O15078 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.21■□□□□ 0.34
CEP290O15078 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.21■□□□□ 0.34
CEP290O15078 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CEP290O15078 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 AL512652.2-201ENST00000625156 1716 ntBASIC17.2■□□□□ 0.34
CEP290O15078 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.2■□□□□ 0.34
CEP290O15078 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CEP290O15078 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 PDIA3P2-201ENST00000428073 158 ntBASIC17.2■□□□□ 0.34
CEP290O15078 RPL18P13-201ENST00000478088 569 ntBASIC17.2■□□□□ 0.34
CEP290O15078 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CEP290O15078 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.2■□□□□ 0.34
CEP290O15078 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.2■□□□□ 0.34
CEP290O15078 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.2■□□□□ 0.34
CEP290O15078 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.2■□□□□ 0.34
CEP290O15078 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 KRT18P64-201ENST00000434946 1219 ntBASIC17.2■□□□□ 0.34
CEP290O15078 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.2■□□□□ 0.34
CEP290O15078 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CEP290O15078 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CEP290O15078 AC025271.4-201ENST00000621477 1726 ntBASIC17.2■□□□□ 0.34
CEP290O15078 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEP290O15078 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 AC009053.2-201ENST00000563701 2365 ntBASIC17.19■□□□□ 0.34
CEP290O15078 AP000974.1-201ENST00000623909 2387 ntBASIC17.19■□□□□ 0.34
CEP290O15078 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.19■□□□□ 0.34
CEP290O15078 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.19■□□□□ 0.34
CEP290O15078 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.19■□□□□ 0.34
CEP290O15078 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.19■□□□□ 0.34
CEP290O15078 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CEP290O15078 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.19■□□□□ 0.34
CEP290O15078 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 AC078991.1-201ENST00000437297 610 ntBASIC17.19■□□□□ 0.34
CEP290O15078 POU5F1P6-201ENST00000466990 990 ntBASIC17.19■□□□□ 0.34
CEP290O15078 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.19■□□□□ 0.34
CEP290O15078 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CEP290O15078 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CEP290O15078 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.19■□□□□ 0.34
CEP290O15078 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEP290O15078 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.19■□□□□ 0.34
CEP290O15078 DGAT2L7P-201ENST00000602462 744 ntBASIC17.19■□□□□ 0.34
CEP290O15078 AC022748.3-201ENST00000621828 275 ntBASIC17.19■□□□□ 0.34
CEP290O15078 AL121723.1-201ENST00000445194 1519 ntBASIC17.18■□□□□ 0.34
CEP290O15078 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.18■□□□□ 0.34
CEP290O15078 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.18■□□□□ 0.34
CEP290O15078 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 DNM1P30-201ENST00000563586 452 ntBASIC17.18■□□□□ 0.34
CEP290O15078 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.18■□□□□ 0.34
CEP290O15078 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEP290O15078 AC138894.2-201ENST00000602838 371 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms