Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 AC013467.2-201ENST00000605472 835 ntBASIC16.97■□□□□ 0.31
SOX1O00570 AP003392.6-201ENST00000607709 325 ntBASIC16.97■□□□□ 0.31
SOX1O00570 AC132938.4-201ENST00000623835 848 ntBASIC16.97■□□□□ 0.31
SOX1O00570 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SOX1O00570 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.97■□□□□ 0.31
SOX1O00570 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.97■□□□□ 0.31
SOX1O00570 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX1O00570 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.97■□□□□ 0.31
SOX1O00570 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX1O00570 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
SOX1O00570 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX1O00570 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.96■□□□□ 0.31
SOX1O00570 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX1O00570 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.96■□□□□ 0.31
SOX1O00570 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 CNN2P10-201ENST00000443067 918 ntBASIC16.96■□□□□ 0.31
SOX1O00570 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX1O00570 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.96■□□□□ 0.31
SOX1O00570 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.96■□□□□ 0.31
SOX1O00570 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.96■□□□□ 0.31
SOX1O00570 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.96■□□□□ 0.31
SOX1O00570 AC087045.2-201ENST00000606279 1003 ntBASIC16.96■□□□□ 0.31
SOX1O00570 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.96■□□□□ 0.31
SOX1O00570 AC127024.7-201ENST00000625101 200 ntBASIC16.96■□□□□ 0.31
SOX1O00570 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SOX1O00570 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX1O00570 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX1O00570 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX1O00570 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SOX1O00570 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.96■□□□□ 0.3
SOX1O00570 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.96■□□□□ 0.3
SOX1O00570 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SOX1O00570 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SOX1O00570 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SOX1O00570 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SOX1O00570 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX1O00570 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX1O00570 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX1O00570 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SOX1O00570 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SOX1O00570 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX1O00570 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.95■□□□□ 0.3
SOX1O00570 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 AL008707.1-201ENST00000422498 534 ntBASIC16.95■□□□□ 0.3
SOX1O00570 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX1O00570 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.95■□□□□ 0.3
SOX1O00570 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.95■□□□□ 0.3
SOX1O00570 AC025181.2-201ENST00000606994 802 ntBASIC16.95■□□□□ 0.3
SOX1O00570 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX1O00570 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX1O00570 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.95■□□□□ 0.3
SOX1O00570 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.95■□□□□ 0.3
SOX1O00570 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.95■□□□□ 0.3
SOX1O00570 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX1O00570 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX1O00570 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SOX1O00570 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX1O00570 AC025271.4-201ENST00000621477 1726 ntBASIC16.95■□□□□ 0.3
SOX1O00570 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SOX1O00570 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX1O00570 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms