Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 ACA64.2-201ENST00000459014 129 ntBASIC18.68■□□□□ 0.58
USP17L11C9JVI0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 RRP7BP-205ENST00000566851 833 ntBASIC18.68■□□□□ 0.58
USP17L11C9JVI0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 AL662844.4-201ENST00000606367 2838 ntBASIC18.68■□□□□ 0.58
USP17L11C9JVI0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 AC098850.1-201ENST00000419919 790 ntBASIC18.67■□□□□ 0.58
USP17L11C9JVI0 HLA-V-201ENST00000429037 534 ntBASIC18.67■□□□□ 0.58
USP17L11C9JVI0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 KRT17P8-201ENST00000540749 863 ntBASIC18.67■□□□□ 0.58
USP17L11C9JVI0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP17L11C9JVI0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 AC112492.5-201ENST00000421897 457 ntBASIC18.66■□□□□ 0.58
USP17L11C9JVI0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP17L11C9JVI0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 AC092364.2-201ENST00000596710 2692 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms