Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 AL603832.2-201ENST00000566195 2125 ntBASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 AC069224.1-201ENST00000566372 1715 ntBASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
YJEFN3A6XGL0 AC026691.1-201ENST00000602502 2017 ntBASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 CDC14C-201ENST00000428251 1719 ntBASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 BASP1P1-201ENST00000430708 665 ntBASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 AC010491.1-201ENST00000563101 2797 ntBASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.8■□□□□ 0.28
YJEFN3A6XGL0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 KRT8P37-201ENST00000451609 1420 ntBASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 LINC02447-202ENST00000501888 2146 ntBASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 PCDHA1-201ENST00000378133 2726 ntBASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
YJEFN3A6XGL0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms