Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 AC097359.3-201ENST00000603982 1210 ntBASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 ABBA01031663.1-201ENST00000635630 790 ntBASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PLEKHD1A6NEE1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 AC006001.1-201ENST00000325130 474 ntBASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 KRT18P43-201ENST00000469825 1281 ntBASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 AC093813.1-201ENST00000605066 256 ntBASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
PLEKHD1A6NEE1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 RHOQP1-201ENST00000555758 579 ntBASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 AL022328.3-201ENST00000607943 679 ntBASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC24.51■■□□□ 1.51
PLEKHD1A6NEE1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 AL607033.1-201ENST00000623900 1599 ntBASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 AC092506.1-202ENST00000401022 528 ntBASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 AP001258.2-201ENST00000529891 490 ntBASIC24.5■■□□□ 1.51
PLEKHD1A6NEE1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms