Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 ACKR1-201ENST00000368121 1240 ntBASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 AL118558.3-201ENST00000607414 1079 ntBASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC102724428A0A0B4J2F2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 MIR326-201ENST00000362220 95 ntBASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 C2orf27AP3-201ENST00000434123 579 ntBASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 AL354718.3-201ENST00000616414 581 ntBASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 CR382287.1-201ENST00000623954 586 ntBASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LOC102724428A0A0B4J2F2 REXO1L1P-202ENST00000608646 1974 ntBASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 AL121723.1-201ENST00000445194 1519 ntBASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC026410.3-201ENST00000514280 936 ntBASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 AC134407.2-201ENST00000625089 1978 ntBASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LOC102724428A0A0B4J2F2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms