Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 AC020658.6-201ENST00000623564 1870 ntBASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 ARMC10P1-201ENST00000313754 855 ntBASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 FGFR3P6-201ENST00000457012 610 ntBASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV5A0A0B4J249 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC008608.2-201ENST00000606089 416 ntBASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC093458.2-201ENST00000623150 629 ntBASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC006486.2-201ENST00000624246 2199 ntBASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 MIR600HG-201ENST00000449175 5984 ntBASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms