Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC004790.2-201ENST00000623588 572 ntBASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 TP73-AS1-207ENST00000624167 988 ntBASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 AP002414.3-201ENST00000589352 1468 ntBASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 RPS2P28-201ENST00000314255 741 ntBASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 HNRNPDP1-201ENST00000439535 754 ntBASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC018712.1-201ENST00000455767 687 ntBASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 CXCL1P1-201ENST00000502804 216 ntBASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL645728.2-201ENST00000641974 660 ntBASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC008677.1-201ENST00000519230 1561 ntBASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV6-7A0A0A0MS04 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms