Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 BX284668.4-201ENST00000453917 508 ntBASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 AC091804.1-201ENST00000486888 567 ntBASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 MIR4741-201ENST00000579822 90 ntBASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 AC141586.5-201ENST00000624546 2050 ntBASIC18.07■□□□□ 0.48
PTCH2Q9Y6C5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 AC092068.3-201ENST00000587894 2016 ntBASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 AP006547.1-201ENST00000563435 692 ntBASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 AC020914.3-201ENST00000594712 304 ntBASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 AC128714.1-201ENST00000637035 887 ntBASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.06■□□□□ 0.48
PTCH2Q9Y6C5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 AL391256.1-201ENST00000443260 1855 ntBASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 TARDBPP1-201ENST00000442013 1203 ntBASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 AC004898.1-201ENST00000451057 766 ntBASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 MIR5572-201ENST00000583188 137 ntBASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 PCDHB18P-201ENST00000524813 2368 ntBASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTCH2Q9Y6C5 U82695.1-201ENST00000635752 1889 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms