Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM17Q9Y577 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM17Q9Y577 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM17Q9Y577 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM17Q9Y577 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM17Q9Y577 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM17Q9Y577 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM17Q9Y577 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM17Q9Y577 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 FAM197Y7-201ENST00000432892 766 ntBASIC18.11■□□□□ 0.49
TRIM17Q9Y577 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 AC078819.1-201ENST00000547454 765 ntBASIC18.11■□□□□ 0.49
TRIM17Q9Y577 AC012085.1-201ENST00000548270 765 ntBASIC18.11■□□□□ 0.49
TRIM17Q9Y577 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 AC025279.2-201ENST00000569730 653 ntBASIC18.11■□□□□ 0.49
TRIM17Q9Y577 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.11■□□□□ 0.49
TRIM17Q9Y577 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM17Q9Y577 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 AC092978.1-202ENST00000637590 1327 ntBASIC18.1■□□□□ 0.49
TRIM17Q9Y577 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 TARDBPP1-201ENST00000442013 1203 ntBASIC18.1■□□□□ 0.49
TRIM17Q9Y577 HOMER2P2-201ENST00000451621 847 ntBASIC18.1■□□□□ 0.49
TRIM17Q9Y577 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 RPSAP36-202ENST00000494591 1261 ntBASIC18.1■□□□□ 0.49
TRIM17Q9Y577 AC022137.2-201ENST00000503482 481 ntBASIC18.1■□□□□ 0.49
TRIM17Q9Y577 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 NDUFV2P1-201ENST00000596415 907 ntBASIC18.1■□□□□ 0.49
TRIM17Q9Y577 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.1■□□□□ 0.49
TRIM17Q9Y577 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 AL139011.1-202ENST00000642063 584 ntBASIC18.1■□□□□ 0.49
TRIM17Q9Y577 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM17Q9Y577 AL354751.1-201ENST00000412768 1863 ntBASIC18.09■□□□□ 0.49
TRIM17Q9Y577 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms