Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.63□□□□□ -0.23
KCNIP3Q9Y2W7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KCNIP3Q9Y2W7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP3Q9Y2W7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.63□□□□□ -0.23
KCNIP3Q9Y2W7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP3Q9Y2W7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP3Q9Y2W7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 AP003680.1-201ENST00000598970 3660 ntBASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 AC079776.2-201ENST00000641154 1609 ntBASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 RCN1P2-201ENST00000398357 915 ntBASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 AC091607.1-201ENST00000490318 1060 ntBASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 NTF6B-201ENST00000591913 560 ntBASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 AL121672.3-201ENST00000608644 468 ntBASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 NCF1C-201ENST00000438382 1427 ntBASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP3Q9Y2W7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 ST20-AS1-201ENST00000560255 4223 ntBASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 AC087386.2-201ENST00000623212 4637 ntBASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PRYP5-201ENST00000451909 266 ntBASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 AC020658.6-201ENST00000623564 1870 ntBASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
KCNIP3Q9Y2W7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms