Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.55□□□□□ -0.08
POLR1DQ9Y2S0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR1DQ9Y2S0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.55□□□□□ -0.08
POLR1DQ9Y2S0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 RNA5SP419-201ENST00000515908 135 ntBASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 MIR3909-201ENST00000579518 119 ntBASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR1DQ9Y2S0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 AC005622.1-201ENST00000636801 1703 ntBASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 BCAR1-209ENST00000546196 1340 ntBASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 AC064836.3-201ENST00000607928 673 ntBASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR1DQ9Y2S0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms