Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 AC098850.1-201ENST00000419919 790 ntBASIC16.23■□□□□ 0.19
MBD1Q9UIS9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 AC026979.3-201ENST00000607315 403 ntBASIC16.23■□□□□ 0.19
MBD1Q9UIS9 AC020765.3-201ENST00000613051 740 ntBASIC16.23■□□□□ 0.19
MBD1Q9UIS9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.23■□□□□ 0.19
MBD1Q9UIS9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 AC006449.5-201ENST00000610658 2098 ntBASIC16.22■□□□□ 0.19
MBD1Q9UIS9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 AC022210.1-201ENST00000449856 793 ntBASIC16.22■□□□□ 0.19
MBD1Q9UIS9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.22■□□□□ 0.19
MBD1Q9UIS9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 LINC01144-201ENST00000626198 1710 ntBASIC16.22■□□□□ 0.19
MBD1Q9UIS9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MBD1Q9UIS9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 LINC02199-201ENST00000506655 2702 ntBASIC16.21■□□□□ 0.19
MBD1Q9UIS9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 TTTY23B-201ENST00000442790 549 ntBASIC16.21■□□□□ 0.19
MBD1Q9UIS9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 AC123567.1-201ENST00000548294 1261 ntBASIC16.21■□□□□ 0.19
MBD1Q9UIS9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 AC099568.2-201ENST00000609194 695 ntBASIC16.21■□□□□ 0.19
MBD1Q9UIS9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MBD1Q9UIS9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms