Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 KRT8P39-201ENST00000396270 1433 ntBASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC009477.1-201ENST00000452936 217 ntBASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC009407.1-201ENST00000568958 598 ntBASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 RN7SL828P-201ENST00000607615 303 ntBASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC004233.3-201ENST00000607794 1269 ntBASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 TEX28P1-201ENST00000613479 1221 ntBASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 TEX28P2-201ENST00000617764 1221 ntBASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 AC025048.6-201ENST00000634326 1161 ntBASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC6Q9UBN7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 AL513523.2-202ENST00000427283 2040 ntBASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 RPL37AP1-201ENST00000412502 279 ntBASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 SPTLC1P1-201ENST00000447199 261 ntBASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 BANF1P1-201ENST00000553684 263 ntBASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 AC027307.3-201ENST00000594262 1100 ntBASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 AL589739.1-201ENST00000607720 493 ntBASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 CETN4P-206ENST00000642099 2168 ntBASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC6Q9UBN7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms