Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 AC105917.1-201ENST00000506637 2539 ntBASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 MIR4453-201ENST00000584019 89 ntBASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 AC007967.4-201ENST00000614700 386 ntBASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 LINC00628-201ENST00000628516 1289 ntBASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 PRAL-201ENST00000624952 3286 ntBASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BLOC1S4Q9NUP1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 AP003680.1-201ENST00000598970 3660 ntBASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 REXO1L1P-202ENST00000608646 1974 ntBASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 TSEN15P1-201ENST00000423257 515 ntBASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 AL353705.2-201ENST00000428243 662 ntBASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 AC003101.2-201ENST00000612557 442 ntBASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.92■□□□□ 0.46
BLOC1S4Q9NUP1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms