Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 AC138969.3-201ENST00000546612 1459 ntBASIC19.37■□□□□ 0.69
SALL1Q9NSC2 AC138932.2-201ENST00000548268 1459 ntBASIC19.37■□□□□ 0.69
SALL1Q9NSC2 AC126755.4-201ENST00000549796 1459 ntBASIC19.37■□□□□ 0.69
SALL1Q9NSC2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 AZGP1P1-201ENST00000411909 902 ntBASIC19.37■□□□□ 0.69
SALL1Q9NSC2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL1Q9NSC2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 AC008494.3-201ENST00000606615 944 ntBASIC19.36■□□□□ 0.69
SALL1Q9NSC2 AL391069.4-201ENST00000609583 481 ntBASIC19.36■□□□□ 0.69
SALL1Q9NSC2 AC007431.3-201ENST00000623221 587 ntBASIC19.36■□□□□ 0.69
SALL1Q9NSC2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 BNIP3P1-202ENST00000550043 1585 ntBASIC19.36■□□□□ 0.69
SALL1Q9NSC2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL1Q9NSC2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 AL513523.2-202ENST00000427283 2040 ntBASIC19.35■□□□□ 0.69
SALL1Q9NSC2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 AP001282.1-201ENST00000531301 1499 ntBASIC19.35■□□□□ 0.69
SALL1Q9NSC2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms