Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 UPK3BP1-201ENST00000428678 509 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 AC105339.3-201ENST00000560043 636 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 OR7E47P-204ENST00000575924 449 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ACTL9-202ENST00000612068 1252 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 AC008735.5-201ENST00000623544 497 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 AL645728.2-201ENST00000641974 660 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 AC011477.6-201ENST00000604980 1927 ntBASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AC099063.4-201ENST00000641099 1602 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AC093724.1-201ENST00000448659 1027 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AC245100.5-201ENST00000452108 331 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AL031432.2-201ENST00000566714 459 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AL928711.1-201ENST00000570165 459 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 CLEC4GP1-201ENST00000596555 870 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AL445228.2-201ENST00000605589 952 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AL365330.1-201ENST00000607459 531 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 AC004790.2-201ENST00000623588 572 ntBASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE2Q9NRR3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms