Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC008608.2-201ENST00000606089 416 ntBASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 REXO1L3P-201ENST00000622202 1288 ntBASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 PCGF3-213ENST00000620529 1899 ntBASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AL512652.2-201ENST00000625156 1716 ntBASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 LAGE3P1-201ENST00000425356 484 ntBASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AL691432.3-201ENST00000621860 400 ntBASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AL365203.3-201ENST00000609742 2057 ntBASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AL031731.1-201ENST00000642131 2094 ntBASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AL671710.1-201ENST00000610245 2349 ntBASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHB16Q9NRJ7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 AC006449.6-201ENST00000612330 2296 ntBASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 GGT4P-201ENST00000623672 1708 ntBASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 AL596087.1-201ENST00000400979 1969 ntBASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 CYP2A7P1-201ENST00000595391 815 ntBASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 AL732292.2-201ENST00000609649 430 ntBASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 GPAA1P2-202ENST00000606848 1787 ntBASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms