Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C20orf181-201ENST00000623918 480 ntBASIC15.49■□□□□ 0.07
BRF2Q9HAW0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 FAM220BP-201ENST00000377689 816 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 YBX2P1-201ENST00000394192 760 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 MKNK2P1-201ENST00000437526 628 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 SPDYE11-202ENST00000450699 704 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 KRT8P23-201ENST00000560090 1207 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 AC243562.1-201ENST00000560672 389 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 SPDYE9P-201ENST00000570642 692 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 SPDYE10P-202ENST00000612005 668 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 SPDYE8P-202ENST00000612377 668 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 AC132872.4-202ENST00000622924 2756 ntBASIC15.48■□□□□ 0.07
BRF2Q9HAW0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BRF2Q9HAW0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 MIR346-201ENST00000362234 95 ntBASIC15.47■□□□□ 0.07
BRF2Q9HAW0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AL022342.1-201ENST00000400363 863 ntBASIC15.47■□□□□ 0.07
BRF2Q9HAW0 MIR940-201ENST00000401276 94 ntBASIC15.47■□□□□ 0.07
BRF2Q9HAW0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms