Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.96■□□□□ 0.79
UPF2Q9HAU5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 AC020658.6-201ENST00000623564 1870 ntBASIC19.96■□□□□ 0.79
UPF2Q9HAU5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPF2Q9HAU5 TMBIM7P-203ENST00000641617 1718 ntBASIC19.96■□□□□ 0.79
UPF2Q9HAU5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 AC136621.1-201ENST00000624017 2304 ntBASIC19.95■□□□□ 0.78
UPF2Q9HAU5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.95■□□□□ 0.78
UPF2Q9HAU5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 AL136379.1-201ENST00000623471 2642 ntBASIC19.95■□□□□ 0.78
UPF2Q9HAU5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF2Q9HAU5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 MTDHP3-201ENST00000594186 672 ntBASIC19.94■□□□□ 0.78
UPF2Q9HAU5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UPF2Q9HAU5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.93■□□□□ 0.78
UPF2Q9HAU5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 AL160237.2-201ENST00000556165 472 ntBASIC19.93■□□□□ 0.78
UPF2Q9HAU5 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 MTDHP4-201ENST00000600287 670 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms