Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2OQ9C0C9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.81■□□□□ 0.44
UBE2OQ9C0C9 KRT8P22-201ENST00000562317 1415 ntBASIC17.81■□□□□ 0.44
UBE2OQ9C0C9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2OQ9C0C9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 SPDYE17-201ENST00000412399 783 ntBASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 AL162726.2-201ENST00000438986 1017 ntBASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 YBX1P6-201ENST00000442962 1002 ntBASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 MIR5189-201ENST00000577370 114 ntBASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 KRT8P49-201ENST00000604166 1432 ntBASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2OQ9C0C9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 AC006033.1-201ENST00000440505 426 ntBASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 AL118558.3-201ENST00000607414 1079 ntBASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 CU634019.7-201ENST00000624153 1185 ntBASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 FP236241.2-201ENST00000624906 1185 ntBASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 AL021920.2-201ENST00000624828 1351 ntBASIC17.79■□□□□ 0.44
UBE2OQ9C0C9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 ACTG1P3-201ENST00000431775 1114 ntBASIC17.78■□□□□ 0.44
UBE2OQ9C0C9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms