Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC008687.7-202ENST00000637404 953 ntBASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 AC135776.1-201ENST00000319817 2481 ntBASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CNTNAP3Q9BZ76 PCDHA12-202ENST00000613593 2588 ntBASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 AC016694.1-201ENST00000434179 700 ntBASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 AL133466.1-201ENST00000447582 150 ntBASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 AP006547.1-201ENST00000563435 692 ntBASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 AC092337.1-201ENST00000568699 1129 ntBASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 AP001527.2-201ENST00000614441 631 ntBASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 AC005695.3-201ENST00000614522 232 ntBASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNTNAP3Q9BZ76 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 PHGDH-209ENST00000641074 1780 ntBASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 PGAM1P5-201ENST00000548011 764 ntBASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 AC005357.2-202ENST00000590507 1060 ntBASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 AC244669.2-201ENST00000612320 853 ntBASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 AC145423.3-201ENST00000615987 467 ntBASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.39■□□□□ 0.05
CNTNAP3Q9BZ76 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 NFIC-211ENST00000641145 8399 ntBASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.38■□□□□ 0.05
CNTNAP3Q9BZ76 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms