Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 RCN1P2-201ENST00000398357 915 ntBASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 PMS2P1-201ENST00000431037 1228 ntBASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 AL137013.1-201ENST00000432946 1228 ntBASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 AC011498.5-201ENST00000592027 486 ntBASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RHOXF2Q9BQY4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 SLC22A20-204ENST00000530038 1673 ntBASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 TERF1P1-201ENST00000311003 1181 ntBASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 AC087499.1-201ENST00000418141 1075 ntBASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 AC092647.4-201ENST00000457211 535 ntBASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 AC096582.2-201ENST00000510860 516 ntBASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 LINC01101-201ENST00000622953 1884 ntBASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 AC007191.1-201ENST00000623179 2995 ntBASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RHOXF2Q9BQY4 MYO15B-237ENST00000642007 4893 ntBASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 AC020765.3-201ENST00000613051 740 ntBASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RHOXF2Q9BQY4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms