Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AP001005.1-201ENST00000571755 1248 ntBASIC16.21■□□□□ 0.19
CPNE1Q99829 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CPNE1Q99829 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE1Q99829 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE1Q99829 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE1Q99829 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.21■□□□□ 0.19
CPNE1Q99829 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CPNE1Q99829 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE1Q99829 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CPNE1Q99829 AP003680.1-201ENST00000598970 3660 ntBASIC16.21■□□□□ 0.19
CPNE1Q99829 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE1Q99829 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 AP001282.1-201ENST00000531301 1499 ntBASIC16.21■□□□□ 0.19
CPNE1Q99829 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE1Q99829 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE1Q99829 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.21■□□□□ 0.18
CPNE1Q99829 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.21■□□□□ 0.18
CPNE1Q99829 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE1Q99829 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CPNE1Q99829 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.21■□□□□ 0.18
CPNE1Q99829 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CPNE1Q99829 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CPNE1Q99829 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE1Q99829 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE1Q99829 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 AL450487.1-201ENST00000426799 995 ntBASIC16.2■□□□□ 0.18
CPNE1Q99829 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE1Q99829 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE1Q99829 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE1Q99829 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.2■□□□□ 0.18
CPNE1Q99829 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE1Q99829 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE1Q99829 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE1Q99829 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE1Q99829 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE1Q99829 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE1Q99829 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPNE1Q99829 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 SSR4P1-203ENST00000599569 2260 ntBASIC16.2■□□□□ 0.18
CPNE1Q99829 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE1Q99829 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 PMS2P7-201ENST00000506558 1336 ntBASIC16.19■□□□□ 0.18
CPNE1Q99829 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.19■□□□□ 0.18
CPNE1Q99829 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE1Q99829 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.19■□□□□ 0.18
CPNE1Q99829 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CPNE1Q99829 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CPNE1Q99829 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CPNE1Q99829 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.19■□□□□ 0.18
CPNE1Q99829 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 MRPL3P1-201ENST00000400109 1033 ntBASIC16.19■□□□□ 0.18
CPNE1Q99829 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE1Q99829 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.19■□□□□ 0.18
CPNE1Q99829 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE1Q99829 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.19■□□□□ 0.18
CPNE1Q99829 Z83851.2-201ENST00000609564 659 ntBASIC16.19■□□□□ 0.18
CPNE1Q99829 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.19■□□□□ 0.18
CPNE1Q99829 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms