Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 AL691432.1-201ENST00000596308 1422 ntBASIC16.48■□□□□ 0.23
RTP4Q96DX8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 TFAMP1-201ENST00000412727 736 ntBASIC16.48■□□□□ 0.23
RTP4Q96DX8 AL671277.1-201ENST00000429656 993 ntBASIC16.48■□□□□ 0.23
RTP4Q96DX8 HTR5BP-201ENST00000430851 1154 ntBASIC16.48■□□□□ 0.23
RTP4Q96DX8 HMGN1P19-201ENST00000436976 333 ntBASIC16.48■□□□□ 0.23
RTP4Q96DX8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 FAM86C2P-203ENST00000528684 1004 ntBASIC16.48■□□□□ 0.23
RTP4Q96DX8 AC027307.2-201ENST00000591252 911 ntBASIC16.48■□□□□ 0.23
RTP4Q96DX8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 SSR4P1-203ENST00000599569 2260 ntBASIC16.48■□□□□ 0.23
RTP4Q96DX8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTP4Q96DX8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.48■□□□□ 0.23
RTP4Q96DX8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.47■□□□□ 0.23
RTP4Q96DX8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RTP4Q96DX8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTP4Q96DX8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTP4Q96DX8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AC073347.1-201ENST00000421633 2643 ntBASIC16.47■□□□□ 0.23
RTP4Q96DX8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 MIR346-201ENST00000362234 95 ntBASIC16.47■□□□□ 0.23
RTP4Q96DX8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 FAM220BP-201ENST00000377689 816 ntBASIC16.47■□□□□ 0.23
RTP4Q96DX8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 MKNK2P1-201ENST00000437526 628 ntBASIC16.47■□□□□ 0.23
RTP4Q96DX8 RN7SL589P-201ENST00000481268 310 ntBASIC16.47■□□□□ 0.23
RTP4Q96DX8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AC243562.2-201ENST00000561247 970 ntBASIC16.47■□□□□ 0.23
RTP4Q96DX8 SNHG9-202ENST00000564014 471 ntBASIC16.47■□□□□ 0.23
RTP4Q96DX8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RTP4Q96DX8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RTP4Q96DX8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTP4Q96DX8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.46■□□□□ 0.23
RTP4Q96DX8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 TMBIM7P-203ENST00000641617 1718 ntBASIC16.46■□□□□ 0.23
RTP4Q96DX8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 AC254562.1-201ENST00000417586 456 ntBASIC16.46■□□□□ 0.23
RTP4Q96DX8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms