Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 AL035456.1-201ENST00000456064 1369 ntBASIC14.36□□□□□ -0.11
APH1AQ96BI3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.36□□□□□ -0.11
APH1AQ96BI3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 AC245100.5-201ENST00000452108 331 ntBASIC14.36□□□□□ -0.11
APH1AQ96BI3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 AC027796.2-201ENST00000575326 344 ntBASIC14.36□□□□□ -0.11
APH1AQ96BI3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
APH1AQ96BI3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.36□□□□□ -0.11
APH1AQ96BI3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APH1AQ96BI3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 AC051619.7-201ENST00000568314 623 ntBASIC14.35□□□□□ -0.11
APH1AQ96BI3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 AL662844.4-201ENST00000606367 2838 ntBASIC14.35□□□□□ -0.11
APH1AQ96BI3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms