Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TMEM54Q969K7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
TMEM54Q969K7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM54Q969K7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM54Q969K7 AL136982.4-201ENST00000437689 1740 ntBASIC14.24□□□□□ -0.13
TMEM54Q969K7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM54Q969K7 AC008894.3-201ENST00000624324 3103 ntBASIC14.24□□□□□ -0.13
TMEM54Q969K7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 BNIP3P1-202ENST00000550043 1585 ntBASIC14.23□□□□□ -0.13
TMEM54Q969K7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 AL353705.2-201ENST00000428243 662 ntBASIC14.23□□□□□ -0.13
TMEM54Q969K7 DNAJB3-202ENST00000449667 1266 ntBASIC14.23□□□□□ -0.13
TMEM54Q969K7 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.23□□□□□ -0.13
TMEM54Q969K7 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 AC027612.4-201ENST00000605371 583 ntBASIC14.23□□□□□ -0.13
TMEM54Q969K7 AP001059.3-201ENST00000619053 235 ntBASIC14.23□□□□□ -0.13
TMEM54Q969K7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.23□□□□□ -0.13
TMEM54Q969K7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM54Q969K7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TMEM54Q969K7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 CYP4F24P-201ENST00000586049 1580 ntBASIC14.22□□□□□ -0.13
TMEM54Q969K7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM54Q969K7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM54Q969K7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms