Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF4Q8WZA2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 KLF2P4-201ENST00000451959 1225 ntBASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 AL022328.1-201ENST00000610050 478 ntBASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.03■□□□□ 0.96
RAPGEF4Q8WZA2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 MIR4525-201ENST00000580000 75 ntBASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF4Q8WZA2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RAPGEF4Q8WZA2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
RAPGEF4Q8WZA2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RAPGEF4Q8WZA2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
RAPGEF4Q8WZA2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
RAPGEF4Q8WZA2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 TOMM22P5-201ENST00000416399 439 ntBASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF4Q8WZA2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms