Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 FAM220BP-201ENST00000377689 816 ntBASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 AC107890.1-201ENST00000422478 521 ntBASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 RNA5SP410-201ENST00000516285 106 ntBASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 AC003101.2-201ENST00000612557 442 ntBASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
FNDC9Q8TBE3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 AC008741.2-201ENST00000612792 3115 ntBASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 MIR770-201ENST00000390219 98 ntBASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 AC005052.1-201ENST00000625181 2492 ntBASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 AL589702.1-201ENST00000641229 1509 ntBASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 AC005622.1-201ENST00000636801 1703 ntBASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FNDC9Q8TBE3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms