Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 RN7SL618P-201ENST00000477850 296 ntBASIC17.37■□□□□ 0.37
BEST2Q8NFU1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 AC022144.1-201ENST00000602255 1580 ntBASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 MRPS18AP1-201ENST00000414458 589 ntBASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.36■□□□□ 0.37
BEST2Q8NFU1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
BEST2Q8NFU1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 AL844908.2-201ENST00000609461 460 ntBASIC17.35■□□□□ 0.37
BEST2Q8NFU1 MIR6069-201ENST00000620069 79 ntBASIC17.35■□□□□ 0.37
BEST2Q8NFU1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms