Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 AC136604.1-201ENST00000418535 575 ntBASIC19.79■□□□□ 0.76
RTL9Q8NET4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 RAB43P1-201ENST00000561790 589 ntBASIC19.79■□□□□ 0.76
RTL9Q8NET4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 AGGF1P2-201ENST00000426656 2106 ntBASIC19.78■□□□□ 0.76
RTL9Q8NET4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 AC022211.2-201ENST00000585075 2527 ntBASIC19.78■□□□□ 0.76
RTL9Q8NET4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 FLJ38576-201ENST00000623820 2459 ntBASIC19.78■□□□□ 0.76
RTL9Q8NET4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 WFDC1-204ENST00000613603 549 ntBASIC19.78■□□□□ 0.76
RTL9Q8NET4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 ALOX12P2-203ENST00000570921 1945 ntBASIC19.78■□□□□ 0.76
RTL9Q8NET4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.78■□□□□ 0.76
RTL9Q8NET4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTL9Q8NET4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 LTB4R2-202ENST00000528054 3092 ntBASIC19.77■□□□□ 0.76
RTL9Q8NET4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 HAUS4P1-201ENST00000406739 1145 ntBASIC19.77■□□□□ 0.76
RTL9Q8NET4 TOMM22P5-201ENST00000416399 439 ntBASIC19.77■□□□□ 0.76
RTL9Q8NET4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 TTTY23B-201ENST00000442790 549 ntBASIC19.77■□□□□ 0.76
RTL9Q8NET4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 HNRNPUP1-201ENST00000554987 333 ntBASIC19.77■□□□□ 0.76
RTL9Q8NET4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 MIR8072-201ENST00000614241 80 ntBASIC19.77■□□□□ 0.76
RTL9Q8NET4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTL9Q8NET4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RTL9Q8NET4 AC005052.1-201ENST00000625181 2492 ntBASIC19.77■□□□□ 0.75
RTL9Q8NET4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RTL9Q8NET4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTL9Q8NET4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTL9Q8NET4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RTL9Q8NET4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTL9Q8NET4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms