Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC168Q8NDH2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.41□□□□□ -0.26
CCDC168Q8NDH2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC168Q8NDH2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 FGFR3P5-201ENST00000564496 886 ntBASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 AHCYP2-201ENST00000430630 1300 ntBASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 SPTLC1P5-201ENST00000450718 252 ntBASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 AC245884.6-201ENST00000515672 1067 ntBASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC168Q8NDH2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
CCDC168Q8NDH2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.4□□□□□ -0.27
CCDC168Q8NDH2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.4□□□□□ -0.27
CCDC168Q8NDH2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 KRT8P39-201ENST00000396270 1433 ntBASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 MIR4741-201ENST00000579822 90 ntBASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 ABALON-201ENST00000629058 1903 ntBASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 MIR1202-201ENST00000408529 83 ntBASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 IQSEC3P1-201ENST00000538799 536 ntBASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 AC244452.3-201ENST00000636814 210 ntBASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC168Q8NDH2 REXO1L8P-201ENST00000604378 1897 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms