Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
VPS8Q8N3P4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS8Q8N3P4 AC007541.1-201ENST00000570282 1469 ntBASIC24.97■■□□□ 1.59
VPS8Q8N3P4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS8Q8N3P4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 COX5BP8-201ENST00000416911 349 ntBASIC24.95■■□□□ 1.59
VPS8Q8N3P4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 RARRES2P5-201ENST00000564013 466 ntBASIC24.95■■□□□ 1.59
VPS8Q8N3P4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC24.95■■□□□ 1.59
VPS8Q8N3P4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AL353779.1-201ENST00000434793 351 ntBASIC24.95■■□□□ 1.58
VPS8Q8N3P4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC24.95■■□□□ 1.58
VPS8Q8N3P4 AC000095.1-201ENST00000603208 874 ntBASIC24.95■■□□□ 1.58
VPS8Q8N3P4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS8Q8N3P4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms