Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTTNQ86VV8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AL513210.1-201ENST00000629608 234 ntBASIC14.37□□□□□ -0.11
RTTNQ86VV8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AL391005.1-201ENST00000623953 2435 ntBASIC14.37□□□□□ -0.11
RTTNQ86VV8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 MIR4745-201ENST00000577608 62 ntBASIC14.37□□□□□ -0.11
RTTNQ86VV8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AC091812.2-201ENST00000619081 385 ntBASIC14.37□□□□□ -0.11
RTTNQ86VV8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.37□□□□□ -0.11
RTTNQ86VV8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AC024909.3-201ENST00000611513 2257 ntBASIC14.37□□□□□ -0.11
RTTNQ86VV8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTTNQ86VV8 AL161772.1-201ENST00000610494 4412 ntBASIC14.36□□□□□ -0.11
RTTNQ86VV8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 CEND1P1-201ENST00000451006 455 ntBASIC14.36□□□□□ -0.11
RTTNQ86VV8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 AL138918.1-201ENST00000568306 659 ntBASIC14.36□□□□□ -0.11
RTTNQ86VV8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 AC005622.1-201ENST00000636801 1703 ntBASIC14.36□□□□□ -0.11
RTTNQ86VV8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms