Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.54■□□□□ 0.08
RNF44Q7L0R7 AC245100.5-201ENST00000452108 331 ntBASIC15.54■□□□□ 0.08
RNF44Q7L0R7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 BANF1P1-201ENST00000553684 263 ntBASIC15.54■□□□□ 0.08
RNF44Q7L0R7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 AC003101.2-201ENST00000612557 442 ntBASIC15.54■□□□□ 0.08
RNF44Q7L0R7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.54■□□□□ 0.08
RNF44Q7L0R7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF44Q7L0R7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 AL035456.1-201ENST00000456064 1369 ntBASIC15.53■□□□□ 0.08
RNF44Q7L0R7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 AC107890.1-201ENST00000422478 521 ntBASIC15.53■□□□□ 0.08
RNF44Q7L0R7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 AC140878.1-201ENST00000565277 250 ntBASIC15.53■□□□□ 0.08
RNF44Q7L0R7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF44Q7L0R7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RNF44Q7L0R7 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms