Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 REXO1L8P-201ENST00000604378 1897 ntBASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 LINC01568-207ENST00000641790 1380 ntBASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 TSPY12P-201ENST00000421279 868 ntBASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 AC111152.3-201ENST00000569699 673 ntBASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 LINC00552-201ENST00000625151 2579 ntBASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 AC015656.1-201ENST00000624209 3578 ntBASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
KCNIP4Q6PIL6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 AC005252.3-201ENST00000623855 2258 ntBASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 KRT89P-201ENST00000620027 1478 ntBASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
KCNIP4Q6PIL6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms