Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 LINC00554-201ENST00000564841 3011 ntBASIC16.6■□□□□ 0.25
CASC4Q6P4E1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 IGLL3P-201ENST00000412472 434 ntBASIC16.6■□□□□ 0.25
CASC4Q6P4E1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 MIR3909-201ENST00000579518 119 ntBASIC16.59■□□□□ 0.25
CASC4Q6P4E1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.59■□□□□ 0.25
CASC4Q6P4E1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.58■□□□□ 0.25
CASC4Q6P4E1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 MIR648-201ENST00000385046 94 ntBASIC16.58■□□□□ 0.24
CASC4Q6P4E1 HCG4B-203ENST00000450128 991 ntBASIC16.58■□□□□ 0.24
CASC4Q6P4E1 KRT126P-201ENST00000549467 1181 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms