Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC144NLQ6NUI1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 REXO1L8P-201ENST00000604378 1897 ntBASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC144NLQ6NUI1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 AL118508.1-201ENST00000613502 2345 ntBASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 AL353705.2-201ENST00000428243 662 ntBASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 MIR4321-201ENST00000592276 80 ntBASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 AP001160.2-201ENST00000596071 487 ntBASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC144NLQ6NUI1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms