Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AC055876.2-201ENST00000531834 546 ntBASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AC092337.1-201ENST00000568699 1129 ntBASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AC132938.2-201ENST00000579188 680 ntBASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AL591163.1-201ENST00000641757 987 ntBASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNFT1Q5M7Z0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 AP006294.1-201ENST00000415407 339 ntBASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 RN7SL752P-201ENST00000463779 287 ntBASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 CTBP2P3-201ENST00000585629 1255 ntBASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 AC074044.1-201ENST00000609673 707 ntBASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.52□□□□□ -0.09
RNFT1Q5M7Z0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 MYCLP2-201ENST00000449268 967 ntBASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 ELK1P1-201ENST00000485699 580 ntBASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.51□□□□□ -0.09
RNFT1Q5M7Z0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms