Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TWISTNBQ3B726 CDC14C-201ENST00000428251 1719 ntBASIC20.7■□□□□ 0.9
TWISTNBQ3B726 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TWISTNBQ3B726 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 EEF1DP4-201ENST00000446006 880 ntBASIC20.69■□□□□ 0.9
TWISTNBQ3B726 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 AC026691.1-201ENST00000602502 2017 ntBASIC20.69■□□□□ 0.9
TWISTNBQ3B726 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TWISTNBQ3B726 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 HIST3H2BA-201ENST00000436555 524 ntBASIC20.68■□□□□ 0.9
TWISTNBQ3B726 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 KRT8P37-201ENST00000451609 1420 ntBASIC20.68■□□□□ 0.9
TWISTNBQ3B726 AL513523.2-202ENST00000427283 2040 ntBASIC20.68■□□□□ 0.9
TWISTNBQ3B726 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 LINC02447-202ENST00000501888 2146 ntBASIC20.68■□□□□ 0.9
TWISTNBQ3B726 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TWISTNBQ3B726 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.67■□□□□ 0.9
TWISTNBQ3B726 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 BASP1P1-201ENST00000430708 665 ntBASIC20.67■□□□□ 0.9
TWISTNBQ3B726 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.67■□□□□ 0.9
TWISTNBQ3B726 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 AC004890.2-204ENST00000481968 304 ntBASIC20.67■□□□□ 0.9
TWISTNBQ3B726 AL512361.1-201ENST00000554200 418 ntBASIC20.67■□□□□ 0.9
TWISTNBQ3B726 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 AL844908.2-201ENST00000609461 460 ntBASIC20.67■□□□□ 0.9
TWISTNBQ3B726 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TWISTNBQ3B726 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.66■□□□□ 0.9
TWISTNBQ3B726 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms