Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
EFNB3Q15768 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
EFNB3Q15768 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB3Q15768 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
EFNB3Q15768 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
EFNB3Q15768 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
EFNB3Q15768 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.79□□□□□ -0.2
EFNB3Q15768 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.79□□□□□ -0.2
EFNB3Q15768 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.79□□□□□ -0.2
EFNB3Q15768 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.79□□□□□ -0.2
EFNB3Q15768 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.79□□□□□ -0.2
EFNB3Q15768 AC009407.1-201ENST00000568958 598 ntBASIC13.79□□□□□ -0.2
EFNB3Q15768 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
EFNB3Q15768 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.79□□□□□ -0.2
EFNB3Q15768 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
EFNB3Q15768 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.79□□□□□ -0.2
EFNB3Q15768 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.79□□□□□ -0.2
EFNB3Q15768 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
EFNB3Q15768 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.79□□□□□ -0.2
EFNB3Q15768 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNB3Q15768 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNB3Q15768 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
EFNB3Q15768 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.78□□□□□ -0.2
EFNB3Q15768 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB3Q15768 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB3Q15768 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
EFNB3Q15768 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
EFNB3Q15768 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB3Q15768 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 SERBP1P5-201ENST00000510079 1181 ntBASIC13.78□□□□□ -0.2
EFNB3Q15768 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.78□□□□□ -0.2
EFNB3Q15768 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.78□□□□□ -0.2
EFNB3Q15768 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 AC010336.2-201ENST00000564226 506 ntBASIC13.78□□□□□ -0.2
EFNB3Q15768 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB3Q15768 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
EFNB3Q15768 MIR6069-201ENST00000620069 79 ntBASIC13.78□□□□□ -0.2
EFNB3Q15768 AL033527.5-202ENST00000641632 1098 ntBASIC13.78□□□□□ -0.2
EFNB3Q15768 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
EFNB3Q15768 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 CICP6-201ENST00000457191 2729 ntBASIC13.78□□□□□ -0.2
EFNB3Q15768 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB3Q15768 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNB3Q15768 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB3Q15768 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNB3Q15768 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB3Q15768 FER1L4-210ENST00000615531 5998 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms