Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 HYMAI-201ENST00000635591 3347 ntBASIC17.29■□□□□ 0.36
CDR2Q01850 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDR2Q01850 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 GPX1P2-201ENST00000429271 606 ntBASIC17.29■□□□□ 0.36
CDR2Q01850 AC098859.1-201ENST00000502915 1238 ntBASIC17.29■□□□□ 0.36
CDR2Q01850 POLD2P1-201ENST00000511220 997 ntBASIC17.29■□□□□ 0.36
CDR2Q01850 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 FAM86C2P-203ENST00000528684 1004 ntBASIC17.29■□□□□ 0.36
CDR2Q01850 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.29■□□□□ 0.36
CDR2Q01850 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.29■□□□□ 0.36
CDR2Q01850 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDR2Q01850 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CDR2Q01850 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
CDR2Q01850 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDR2Q01850 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDR2Q01850 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDR2Q01850 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDR2Q01850 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CDR2Q01850 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CDR2Q01850 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDR2Q01850 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.28■□□□□ 0.36
CDR2Q01850 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.28■□□□□ 0.36
CDR2Q01850 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.28■□□□□ 0.36
CDR2Q01850 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
CDR2Q01850 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.28■□□□□ 0.36
CDR2Q01850 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.28■□□□□ 0.36
CDR2Q01850 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.28■□□□□ 0.36
CDR2Q01850 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.28■□□□□ 0.36
CDR2Q01850 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 AC027307.2-201ENST00000591252 911 ntBASIC17.28■□□□□ 0.36
CDR2Q01850 SPTSSB-204ENST00000617024 1292 ntBASIC17.28■□□□□ 0.36
CDR2Q01850 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.28■□□□□ 0.36
CDR2Q01850 AC008267.7-201ENST00000624570 1194 ntBASIC17.28■□□□□ 0.36
CDR2Q01850 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CDR2Q01850 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.28■□□□□ 0.36
CDR2Q01850 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.28■□□□□ 0.36
CDR2Q01850 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDR2Q01850 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDR2Q01850 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.28■□□□□ 0.36
CDR2Q01850 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDR2Q01850 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDR2Q01850 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CDR2Q01850 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.27■□□□□ 0.36
CDR2Q01850 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.27■□□□□ 0.36
CDR2Q01850 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.27■□□□□ 0.36
CDR2Q01850 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CDR2Q01850 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CDR2Q01850 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.27■□□□□ 0.36
CDR2Q01850 AC004832.2-201ENST00000426397 482 ntBASIC17.27■□□□□ 0.36
CDR2Q01850 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.27■□□□□ 0.36
CDR2Q01850 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.27■□□□□ 0.36
CDR2Q01850 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.27■□□□□ 0.36
CDR2Q01850 RN7SL589P-201ENST00000481268 310 ntBASIC17.27■□□□□ 0.36
CDR2Q01850 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.27■□□□□ 0.36
CDR2Q01850 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.27■□□□□ 0.36
CDR2Q01850 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.27■□□□□ 0.36
CDR2Q01850 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms