Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CCNA1P78396 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNA1P78396 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCNA1P78396 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNA1P78396 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNA1P78396 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNA1P78396 PDIA3P1-201ENST00000471856 1510 ntBASIC18.28■□□□□ 0.52
CCNA1P78396 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNA1P78396 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNA1P78396 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNA1P78396 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNA1P78396 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCNA1P78396 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCNA1P78396 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCNA1P78396 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNA1P78396 TARDBPP1-201ENST00000442013 1203 ntBASIC18.27■□□□□ 0.52
CCNA1P78396 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCNA1P78396 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.27■□□□□ 0.52
CCNA1P78396 PTP4A1P2-201ENST00000546033 454 ntBASIC18.27■□□□□ 0.52
CCNA1P78396 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.27■□□□□ 0.52
CCNA1P78396 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNA1P78396 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNA1P78396 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNA1P78396 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.27■□□□□ 0.51
CCNA1P78396 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCNA1P78396 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCNA1P78396 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNA1P78396 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 TOMM22P5-201ENST00000416399 439 ntBASIC18.26■□□□□ 0.51
CCNA1P78396 AC134915.1-201ENST00000426461 574 ntBASIC18.26■□□□□ 0.51
CCNA1P78396 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNA1P78396 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.26■□□□□ 0.51
CCNA1P78396 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.26■□□□□ 0.51
CCNA1P78396 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.26■□□□□ 0.51
CCNA1P78396 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNA1P78396 AL359711.2-201ENST00000563105 872 ntBASIC18.26■□□□□ 0.51
CCNA1P78396 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNA1P78396 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNA1P78396 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 AC005915.1-201ENST00000624912 2018 ntBASIC18.26■□□□□ 0.51
CCNA1P78396 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNA1P78396 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNA1P78396 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCNA1P78396 AC105020.1-201ENST00000435356 2205 ntBASIC18.26■□□□□ 0.51
CCNA1P78396 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNA1P78396 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.25■□□□□ 0.51
CCNA1P78396 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 HLA-A-202ENST00000376806 1854 ntBASIC18.25■□□□□ 0.51
CCNA1P78396 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.25■□□□□ 0.51
CCNA1P78396 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCNA1P78396 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.25■□□□□ 0.51
CCNA1P78396 SOCS2P1-201ENST00000417727 557 ntBASIC18.25■□□□□ 0.51
CCNA1P78396 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.25■□□□□ 0.51
CCNA1P78396 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.25■□□□□ 0.51
CCNA1P78396 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.25■□□□□ 0.51
CCNA1P78396 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.25■□□□□ 0.51
CCNA1P78396 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNA1P78396 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CCNA1P78396 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNA1P78396 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNA1P78396 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNA1P78396 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNA1P78396 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNA1P78396 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNA1P78396 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNA1P78396 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCNA1P78396 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms