Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLDN20P56880 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN20P56880 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN20P56880 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN20P56880 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN20P56880 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN20P56880 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CLDN20P56880 HLA-J-202ENST00000469281 1241 ntBASIC14.9□□□□□ -0.02
CLDN20P56880 KRT18P34-201ENST00000488218 1270 ntBASIC14.9□□□□□ -0.02
CLDN20P56880 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN20P56880 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN20P56880 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN20P56880 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN20P56880 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN20P56880 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
CLDN20P56880 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN20P56880 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN20P56880 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CLDN20P56880 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN20P56880 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN20P56880 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN20P56880 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN20P56880 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN20P56880 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN20P56880 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN20P56880 GGT4P-201ENST00000623672 1708 ntBASIC14.89□□□□□ -0.03
CLDN20P56880 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 FAM45BP-202ENST00000592932 1624 ntBASIC14.89□□□□□ -0.03
CLDN20P56880 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN20P56880 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN20P56880 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN20P56880 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN20P56880 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 AC005237.2-201ENST00000434368 219 ntBASIC14.89□□□□□ -0.03
CLDN20P56880 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN20P56880 AC069335.1-201ENST00000489972 472 ntBASIC14.89□□□□□ -0.03
CLDN20P56880 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN20P56880 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN20P56880 AL138918.1-201ENST00000568306 659 ntBASIC14.89□□□□□ -0.03
CLDN20P56880 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.89□□□□□ -0.03
CLDN20P56880 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN20P56880 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms