Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLDN12P56749 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 TMPOP1-202ENST00000424642 1267 ntBASIC14.15□□□□□ -0.14
CLDN12P56749 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 AC107918.2-201ENST00000530817 355 ntBASIC14.15□□□□□ -0.14
CLDN12P56749 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN12P56749 AC012615.1-201ENST00000565797 1299 ntBASIC14.15□□□□□ -0.14
CLDN12P56749 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CLDN12P56749 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 AF228730.7-201ENST00000641842 219 ntBASIC14.15□□□□□ -0.14
CLDN12P56749 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN12P56749 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLDN12P56749 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN12P56749 MIR600HG-201ENST00000449175 5984 ntBASIC14.15□□□□□ -0.14
CLDN12P56749 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CLDN12P56749 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CLDN12P56749 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN12P56749 CICP24-201ENST00000605464 2705 ntBASIC14.14□□□□□ -0.15
CLDN12P56749 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CLDN12P56749 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN12P56749 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN12P56749 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLDN12P56749 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.14□□□□□ -0.15
CLDN12P56749 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 PCED1CP-201ENST00000419887 785 ntBASIC14.14□□□□□ -0.15
CLDN12P56749 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN12P56749 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN12P56749 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN12P56749 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN12P56749 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.14□□□□□ -0.15
CLDN12P56749 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN12P56749 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN12P56749 AC138894.3-201ENST00000603787 634 ntBASIC14.14□□□□□ -0.15
CLDN12P56749 AP001350.2-201ENST00000625104 1094 ntBASIC14.14□□□□□ -0.15
CLDN12P56749 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN12P56749 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN12P56749 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms