Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN6P56747 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN6P56747 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN6P56747 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLDN6P56747 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLDN6P56747 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN6P56747 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN6P56747 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLDN6P56747 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLDN6P56747 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 AL031731.1-201ENST00000642131 2094 ntBASIC15.49■□□□□ 0.07
CLDN6P56747 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN6P56747 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.49■□□□□ 0.07
CLDN6P56747 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN6P56747 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN6P56747 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.49■□□□□ 0.07
CLDN6P56747 MIR6787-201ENST00000616675 61 ntBASIC15.49■□□□□ 0.07
CLDN6P56747 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN6P56747 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN6P56747 PCDHA12-202ENST00000613593 2588 ntBASIC15.49■□□□□ 0.07
CLDN6P56747 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN6P56747 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN6P56747 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLDN6P56747 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN6P56747 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CLDN6P56747 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CLDN6P56747 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLDN6P56747 AP001094.4-201ENST00000579008 2176 ntBASIC15.48■□□□□ 0.07
CLDN6P56747 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLDN6P56747 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLDN6P56747 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.48■□□□□ 0.07
CLDN6P56747 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 AL139010.1-201ENST00000454878 894 ntBASIC15.48■□□□□ 0.07
CLDN6P56747 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.48■□□□□ 0.07
CLDN6P56747 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLDN6P56747 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.48■□□□□ 0.07
CLDN6P56747 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.48■□□□□ 0.07
CLDN6P56747 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN6P56747 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 TIMM17BP1-201ENST00000545713 516 ntBASIC15.48■□□□□ 0.07
CLDN6P56747 AC092337.1-201ENST00000568699 1129 ntBASIC15.48■□□□□ 0.07
CLDN6P56747 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.48■□□□□ 0.07
CLDN6P56747 LINC01115-203ENST00000606068 577 ntBASIC15.48■□□□□ 0.07
CLDN6P56747 AC074044.1-201ENST00000609673 707 ntBASIC15.48■□□□□ 0.07
CLDN6P56747 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN6P56747 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN6P56747 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN6P56747 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN6P56747 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN6P56747 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLDN6P56747 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms