Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
AP1S2P56377 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.79■□□□□ 0.12
AP1S2P56377 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S2P56377 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S2P56377 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S2P56377 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S2P56377 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S2P56377 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 HLA-H-201ENST00000383620 1096 ntBASIC15.79■□□□□ 0.12
AP1S2P56377 BX842568.4-201ENST00000421222 227 ntBASIC15.79■□□□□ 0.12
AP1S2P56377 GPX1P2-201ENST00000429271 606 ntBASIC15.79■□□□□ 0.12
AP1S2P56377 AL592309.1-201ENST00000443127 649 ntBASIC15.79■□□□□ 0.12
AP1S2P56377 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.79■□□□□ 0.12
AP1S2P56377 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.79■□□□□ 0.12
AP1S2P56377 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.79■□□□□ 0.12
AP1S2P56377 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S2P56377 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S2P56377 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
AP1S2P56377 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
AP1S2P56377 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.79■□□□□ 0.12
AP1S2P56377 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S2P56377 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
AP1S2P56377 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S2P56377 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.78■□□□□ 0.12
AP1S2P56377 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 AC010491.1-201ENST00000563101 2797 ntBASIC15.78■□□□□ 0.12
AP1S2P56377 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 LINC02199-201ENST00000506655 2702 ntBASIC15.78■□□□□ 0.12
AP1S2P56377 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S2P56377 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.78■□□□□ 0.12
AP1S2P56377 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
AP1S2P56377 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.78■□□□□ 0.12
AP1S2P56377 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.78■□□□□ 0.12
AP1S2P56377 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S2P56377 AC055717.3-201ENST00000622967 595 ntBASIC15.78■□□□□ 0.12
AP1S2P56377 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S2P56377 AC105339.1-204ENST00000636249 355 ntBASIC15.78■□□□□ 0.12
AP1S2P56377 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S2P56377 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP1S2P56377 AL162727.3-201ENST00000635661 2787 ntBASIC15.78■□□□□ 0.12
AP1S2P56377 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
AP1S2P56377 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
AP1S2P56377 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S2P56377 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.77■□□□□ 0.12
AP1S2P56377 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S2P56377 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S2P56377 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S2P56377 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S2P56377 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms