Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC026979.3-201ENST00000607315 403 ntBASIC16.08■□□□□ 0.16
ZNF140P52738 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF140P52738 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ZNF140P52738 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ZNF140P52738 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ZNF140P52738 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF140P52738 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF140P52738 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF140P52738 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF140P52738 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF140P52738 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF140P52738 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
ZNF140P52738 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ZNF140P52738 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF140P52738 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 EEF1DP4-201ENST00000446006 880 ntBASIC16.07■□□□□ 0.16
ZNF140P52738 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF140P52738 AL512356.2-201ENST00000546955 174 ntBASIC16.07■□□□□ 0.16
ZNF140P52738 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.07■□□□□ 0.16
ZNF140P52738 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 AC007967.4-201ENST00000614700 386 ntBASIC16.07■□□□□ 0.16
ZNF140P52738 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF140P52738 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF140P52738 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ZNF140P52738 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF140P52738 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ZNF140P52738 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF140P52738 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF140P52738 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ZNF140P52738 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF140P52738 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF140P52738 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 AL139400.1-201ENST00000366220 510 ntBASIC16.06■□□□□ 0.16
ZNF140P52738 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF140P52738 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF140P52738 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF140P52738 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF140P52738 AC105021.1-202ENST00000570572 669 ntBASIC16.06■□□□□ 0.16
ZNF140P52738 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF140P52738 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF140P52738 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF140P52738 MIR6080-201ENST00000617359 66 ntBASIC16.06■□□□□ 0.16
ZNF140P52738 AC139530.3-201ENST00000620344 690 ntBASIC16.06■□□□□ 0.16
ZNF140P52738 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF140P52738 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF140P52738 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.06■□□□□ 0.16
ZNF140P52738 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ZNF140P52738 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF140P52738 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF140P52738 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNF140P52738 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
ZNF140P52738 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ZNF140P52738 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.05■□□□□ 0.16
ZNF140P52738 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ZNF140P52738 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF140P52738 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.05■□□□□ 0.16
ZNF140P52738 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF140P52738 HLA-J-203ENST00000494367 1087 ntBASIC16.05■□□□□ 0.16
ZNF140P52738 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms