Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
BRCA2P51587 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.77■□□□□ 0.44
BRCA2P51587 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.77■□□□□ 0.44
BRCA2P51587 C2orf27AP3-201ENST00000434123 579 ntBASIC17.77■□□□□ 0.44
BRCA2P51587 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.77■□□□□ 0.44
BRCA2P51587 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
BRCA2P51587 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.77■□□□□ 0.44
BRCA2P51587 AC120045.2-201ENST00000567334 178 ntBASIC17.77■□□□□ 0.44
BRCA2P51587 AL354718.3-201ENST00000616414 581 ntBASIC17.77■□□□□ 0.44
BRCA2P51587 CR382287.1-201ENST00000623954 586 ntBASIC17.77■□□□□ 0.44
BRCA2P51587 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.77■□□□□ 0.44
BRCA2P51587 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRCA2P51587 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCA2P51587 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
BRCA2P51587 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCA2P51587 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRCA2P51587 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.77■□□□□ 0.44
BRCA2P51587 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BRCA2P51587 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BRCA2P51587 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
BRCA2P51587 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.77■□□□□ 0.43
BRCA2P51587 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.77■□□□□ 0.43
BRCA2P51587 AC044849.1-201ENST00000519737 1188 ntBASIC17.77■□□□□ 0.43
BRCA2P51587 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.77■□□□□ 0.43
BRCA2P51587 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.77■□□□□ 0.43
BRCA2P51587 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
BRCA2P51587 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
BRCA2P51587 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
BRCA2P51587 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
BRCA2P51587 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BRCA2P51587 TOMM22P5-201ENST00000416399 439 ntBASIC17.76■□□□□ 0.43
BRCA2P51587 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.76■□□□□ 0.43
BRCA2P51587 AL139011.1-202ENST00000642063 584 ntBASIC17.76■□□□□ 0.43
BRCA2P51587 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
BRCA2P51587 AC015818.8-201ENST00000587907 1519 ntBASIC17.76■□□□□ 0.43
BRCA2P51587 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.76■□□□□ 0.43
BRCA2P51587 AC078819.1-201ENST00000547454 765 ntBASIC17.76■□□□□ 0.43
BRCA2P51587 AC012085.1-201ENST00000548270 765 ntBASIC17.76■□□□□ 0.43
BRCA2P51587 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.76■□□□□ 0.43
BRCA2P51587 AP000346.4-201ENST00000614827 381 ntBASIC17.76■□□□□ 0.43
BRCA2P51587 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.76■□□□□ 0.43
BRCA2P51587 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.76■□□□□ 0.43
BRCA2P51587 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
BRCA2P51587 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRCA2P51587 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.76■□□□□ 0.43
BRCA2P51587 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BRCA2P51587 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.76■□□□□ 0.43
BRCA2P51587 AL138709.1-201ENST00000614840 1693 ntBASIC17.76■□□□□ 0.43
BRCA2P51587 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.75■□□□□ 0.43
BRCA2P51587 AC074338.1-201ENST00000416825 156 ntBASIC17.75■□□□□ 0.43
BRCA2P51587 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
BRCA2P51587 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.75■□□□□ 0.43
BRCA2P51587 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 LINC02012-201ENST00000608206 1725 ntBASIC17.75■□□□□ 0.43
BRCA2P51587 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.75■□□□□ 0.43
BRCA2P51587 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.75■□□□□ 0.43
BRCA2P51587 EEF1DP4-201ENST00000446006 880 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms