Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 AL627223.1-201ENST00000416693 442 ntBASIC15.6■□□□□ 0.09
SLC6A12P48065 FAM58DP-201ENST00000428076 619 ntBASIC15.6■□□□□ 0.09
SLC6A12P48065 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 AP000344.2-201ENST00000512987 629 ntBASIC15.6■□□□□ 0.09
SLC6A12P48065 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.6■□□□□ 0.09
SLC6A12P48065 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.6■□□□□ 0.09
SLC6A12P48065 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
SLC6A12P48065 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SLC6A12P48065 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC6A12P48065 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
SLC6A12P48065 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC6A12P48065 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC6A12P48065 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC6A12P48065 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC6A12P48065 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC6A12P48065 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SLC6A12P48065 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC6A12P48065 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC6A12P48065 AC004987.2-201ENST00000395959 1148 ntBASIC15.59■□□□□ 0.09
SLC6A12P48065 AC005237.2-201ENST00000434368 219 ntBASIC15.59■□□□□ 0.09
SLC6A12P48065 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC6A12P48065 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SLC6A12P48065 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SLC6A12P48065 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC6A12P48065 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC6A12P48065 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.58■□□□□ 0.09
SLC6A12P48065 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC6A12P48065 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC6A12P48065 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC6A12P48065 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.58■□□□□ 0.09
SLC6A12P48065 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.58■□□□□ 0.09
SLC6A12P48065 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC6A12P48065 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SLC6A12P48065 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC6A12P48065 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SLC6A12P48065 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SLC6A12P48065 KRT18P32-201ENST00000424695 1287 ntBASIC15.58■□□□□ 0.08
SLC6A12P48065 GPS2P2-201ENST00000430745 888 ntBASIC15.58■□□□□ 0.08
SLC6A12P48065 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC6A12P48065 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.58■□□□□ 0.08
SLC6A12P48065 ALG1L8P-201ENST00000533887 760 ntBASIC15.58■□□□□ 0.08
SLC6A12P48065 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC6A12P48065 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC6A12P48065 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
SLC6A12P48065 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC6A12P48065 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC6A12P48065 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC6A12P48065 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC6A12P48065 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
SLC6A12P48065 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC6A12P48065 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC6A12P48065 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC6A12P48065 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
SLC6A12P48065 CYP4F24P-201ENST00000586049 1580 ntBASIC15.58■□□□□ 0.08
SLC6A12P48065 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC6A12P48065 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.58■□□□□ 0.08
SLC6A12P48065 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms